Description : histone H1-3
Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Zea release: GRMZM2G080274 | |
Cluster | HCCA clusters: Cluster_54 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g55260 | No alias | winged-helix DNA-binding transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
Brara.D01833.1 | No alias | linker histone *(H1) | 0.03 | Orthogroups_2024-Update | |
Glyma.10G033100 | No alias | winged-helix DNA-binding transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.10G163300 | No alias | winged-helix DNA-binding transcription factor family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.20G225900 | No alias | winged-helix DNA-binding transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G094400.5 | No alias | linker histone *(H1) | 0.06 | Orthogroups_2024-Update | |
HORVU5Hr1G106550.2 | No alias | linker histone *(H1) | 0.04 | Orthogroups_2024-Update | |
HORVU5Hr1G106610.2 | No alias | linker histone *(H1) | 0.06 | Orthogroups_2024-Update | |
HORVU5Hr1G106730.2 | No alias | linker histone *(H1) | 0.04 | Orthogroups_2024-Update | |
Kfl00023_0480 | kfl00023_0480_v1.1 | (p23444|h1_maize : 87.4) Histone H1 - Zea mays (Maize) &... | 0.02 | Orthogroups_2024-Update | |
MA_102457g0010 | No alias | (p23444|h1_maize : 101.0) Histone H1 - Zea mays (Maize)... | 0.04 | Orthogroups_2024-Update | |
MA_102574g0010 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
MA_500183g0010 | No alias | (original description: no original description) | 0.05 | Orthogroups_2024-Update | |
MA_5243726g0010 | No alias | (p27806|h1_wheat : 91.3) Histone H1 - Triticum aestivum... | 0.05 | Orthogroups_2024-Update | |
MA_6409g0010 | No alias | (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
PSME_00018264-RA | No alias | (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
PSME_00053828-RA | No alias | (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
PSME_00054433-RA | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
Pp1s33_295V6 | No alias | histone h1 | 0.03 | Orthogroups_2024-Update | |
Seita.4G020700.1 | No alias | linker histone *(H1) | 0.02 | Orthogroups_2024-Update | |
Solyc06g084020 | No alias | histone H1 | 0.03 | Orthogroups_2024-Update | |
Solyc09g083380 | No alias | Histone H1 (AHRD V3.3 *-* H1_MAIZE) | 0.04 | Orthogroups_2024-Update | |
Sopen06g035400 | No alias | linker histone H1 and H5 family | 0.03 | Orthogroups_2024-Update | |
Sopen09g032300 | No alias | linker histone H1 and H5 family | 0.04 | Orthogroups_2024-Update | |
evm.model.contig_2062.24 | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006334 | nucleosome assembly | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 36 | 103 |
No external refs found! |