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  5. GRMZM2G081519

GRMZM2G081519


Description : 5\'-3\' exonuclease family protein


Gene families : OG_42_0005916 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G081519
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Glyma.16G156300 No alias 5\'-3\' exonuclease family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G082130.10 No alias plastidial RNA exonuclease 0.03 Orthogroups_2024-Update
Seita.5G398500.1 No alias plastidial RNA exonuclease 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0000313 organellar ribosome IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005761 mitochondrial ribosome IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
BP GO:0006743 ubiquinone metabolic process IEP Predicted GO
BP GO:0006744 ubiquinone biosynthetic process IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0030150 protein import into mitochondrial matrix IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032465 regulation of cytokinesis IEP Predicted GO
BP GO:0032954 regulation of cytokinetic process IEP Predicted GO
BP GO:0032955 regulation of division septum assembly IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042181 ketone biosynthetic process IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0051302 regulation of cell division IEP Predicted GO
BP GO:0065002 intracellular protein transmembrane transport IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0070585 protein localization to mitochondrion IEP Predicted GO
BP GO:0071806 protein transmembrane transport IEP Predicted GO
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
BP GO:1901661 quinone metabolic process IEP Predicted GO
BP GO:1901663 quinone biosynthetic process IEP Predicted GO
BP GO:1901891 regulation of cell septum assembly IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR020046 5-3_exonucl_a-hlix_arch_N 98 211
IPR020045 DNA_polI_H3TH 253 332
No external refs found!