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  5. At1g23280

At1g23280


Description : Protein MAK16 homolog [Source:UniProtKB/TrEMBL;Acc:F4I4Q1]


Gene families : OG_42_0004708 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004708_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g23280
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Bradi2g14350 No alias MAK16 protein-related 0.04 Orthogroups_2024-Update
Brara.G02435.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Cre02.g145231 No alias MAK16 protein-related 0.03 Orthogroups_2024-Update
Pp1s7_209V6 No alias mak16-like protein rbm13 0.03 Orthogroups_2024-Update
Sobic.003G407600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
evm.model.contig_448.21 No alias (at1g23280 : 221.0) MAK16 protein-related; CONTAINS... 0.03 Orthogroups_2024-Update
evm.model.tig00000144.191 No alias (at1g23280 : 218.0) MAK16 protein-related; CONTAINS... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR029004 L28e/Mak16 6 117
IPR006958 Mak16 139 229
No external refs found!