1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G084195

GRMZM2G084195


Description : Histone superfamily protein


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G084195
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
167497 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
A4A49_58366 No alias histone h4 0.03 Orthogroups_2024-Update
A4A49_59902 No alias histone h4 0.04 Orthogroups_2024-Update
A4A49_60016 No alias histone h4 0.03 Orthogroups_2024-Update
At2g28740 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.04 Orthogroups_2024-Update
At3g53730 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.03 Orthogroups_2024-Update
Bradi1g68190 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g22787 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi2g22991 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g37338 No alias Function unknown 0.02 Orthogroups_2024-Update
Brara.C01885.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.D02284.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.F00466.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.G01399.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.H02899.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Cre06.g264600 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g265050 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g265450 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g268000 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre06.g271300 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g274150 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g274300 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.05 Orthogroups_2024-Update
Cre06.g276650 No alias histone H4 0.03 Orthogroups_2024-Update
Cre12.g504600 No alias histone H4 0.02 Orthogroups_2024-Update
Cre12.g504850 No alias histone H4 0.04 Orthogroups_2024-Update
Cre12.g505450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g709100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G224100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G146481 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G177800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G177900 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G178100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G178200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G074500 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.13G147000 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G190800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G043200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G063200 No alias histone H4 0.03 Orthogroups_2024-Update
Glyma.18G064300 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.18G064401 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G083800 No alias histone H4 0.03 Orthogroups_2024-Update
HORVU1Hr1G020040.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
HORVU1Hr1G020060.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
HORVU1Hr1G071760.3 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU1Hr1G090300.47 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU2Hr1G093680.3 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU3Hr1G088160.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU5Hr1G087830.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU6Hr1G011510.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Kfl00106_g14 kfl00106_g14_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00240_g19 kfl00240_g19_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Kfl00394_0030 kfl00394_0030_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_10428555g0010 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_89764g0010 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_97951g0010 No alias (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Mp4g03080.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp5g22450.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp5g22460.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp5g22470.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
PSME_00034343-RA No alias (at5g59970 : 162.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Pp1s342_32V6 No alias histone h4 0.02 Orthogroups_2024-Update
Seita.6G125400.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
Seita.7G212600.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Sobic.003G057366.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc05g054610 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc06g005420 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc06g005430 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g075830 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g075850 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc11g072840 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc11g072860 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Sopen04g005580 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen05g033090 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen06g001390 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g001400 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g032260 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
Sopen06g032280 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g032360 No alias Core histone H2A/H2B/H3/H4 0.07 Orthogroups_2024-Update
Sopen06g032380 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen11g030510 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen11g030530 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
evm.model.contig_2059.7 No alias (at5g59970 : 154.0) Histone superfamily protein;... 0.01 Orthogroups_2024-Update
evm.model.contig_2255.1 No alias (at5g59970 : 154.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!