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  5. GRMZM2G085089

GRMZM2G085089


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G085089
Cluster HCCA clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
101245 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
181046 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
98955 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Orthogroups_2024-Update
At3g08820 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Orthogroups_2024-Update
At5g39350 No alias Pentatricopeptide repeat-containing protein At5g39350... 0.02 Orthogroups_2024-Update
Bradi5g14000 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 Orthogroups_2024-Update
Brara.H00716.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G264700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G289802 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G053030.5 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G093530.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G038460.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os07g13540 No alias pentatricopeptide repeat domain containing protein,... 0.02 Orthogroups_2024-Update
PSME_00001035-RA No alias (at1g16480 : 699.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00005903-RA No alias (at2g22070 : 612.0) pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00039458-RA No alias (at4g13650 : 677.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
Pp1s15_448V6 No alias MZB10.7; pentatricopeptide (PPR) repeat-containing... 0.02 Orthogroups_2024-Update
Pp1s68_207V6 No alias ppr gene for putative pentatricopeptide repeat-like protein PPR 0.03 Orthogroups_2024-Update
Seita.3G227100.1 No alias RNA editing factor *(MEF21) 0.01 Orthogroups_2024-Update
Seita.4G168200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G162400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G403900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G272600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g049810 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen05g007940 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 274 321
IPR002885 Pentatricopeptide_repeat 348 372
IPR002885 Pentatricopeptide_repeat 147 171
IPR002885 Pentatricopeptide_repeat 175 204
No external refs found!