GRMZM2G085236

Description : ATP binding cassette subfamily B19

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G085236
Cluster	HCCA clusters: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method
123915	No alias	P-glycoprotein 11	0.02	Orthogroups_2024-Update
230688	No alias	ATP binding cassette subfamily B19	0.02	Orthogroups_2024-Update
92485	No alias	ATP binding cassette subfamily B19	0.02	Orthogroups_2024-Update
At1g10680	No alias	ABC transporter B family member 10...	0.03	Orthogroups_2024-Update
Bradi2g47330	No alias	P-glycoprotein 11	0.03	Orthogroups_2024-Update
Bradi2g47337	No alias	ATP binding cassette subfamily B4	0.05	Orthogroups_2024-Update
Bradi2g47360	No alias	P-glycoprotein 11	0.02	Orthogroups_2024-Update
Bradi2g47400	No alias	ATP binding cassette subfamily B4	0.02	Orthogroups_2024-Update
Bradi2g47410	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Bradi3g06577	No alias	ABC transporter family protein	0.03	Orthogroups_2024-Update
Brara.F03154.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Brara.H03115.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Glyma.01G016500	No alias	P-glycoprotein 2	0.02	Orthogroups_2024-Update
Glyma.06G139500	No alias	ATP binding cassette subfamily B19	0.02	Orthogroups_2024-Update
Glyma.13G222000	No alias	P-glycoprotein 9	0.02	Orthogroups_2024-Update
Glyma.16G078100	No alias	ABC transporter family protein	0.02	Orthogroups_2024-Update
Glyma.17G041200	No alias	P-glycoprotein 11	0.01	Orthogroups_2024-Update
HORVU3Hr1G065320.10	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os04g54930	No alias	ABC transporter, ATP-binding protein, putative, expressed	0.03	Orthogroups_2024-Update
Mp1g26440.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
PSME_00011041-RA	No alias	(at4g25960 : 1546.0) P-glycoprotein 2 (PGP2); FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00030174-RA	No alias	(at2g47000 : 1538.0) Multidrug resistance ...	0.02	Orthogroups_2024-Update
PSME_00037351-RA	No alias	(at3g28345 : 1429.0) ABC transporter family protein;...	0.03	Orthogroups_2024-Update
Potri.002G019600	No alias	P-glycoprotein 13	0.04	Orthogroups_2024-Update
Potri.003G094400	No alias	P-glycoprotein 2	0.03	Orthogroups_2024-Update
Potri.006G074100	No alias	ABC transporter family protein	0.02	Orthogroups_2024-Update
Potri.017G085000	No alias	ABC transporter family protein	0.03	Orthogroups_2024-Update
Seita.5G283700.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Sobic.003G139300.3	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Sobic.004G073300.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Sobic.004G073400.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Solyc03g093650	No alias	ABC transporter B family protein (AHRD V3.3 *** A0A072UBK0_MEDTR)	0.03	Orthogroups_2024-Update
Solyc06g009280	No alias	ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR)	0.02	Orthogroups_2024-Update
Sopen02g032160	No alias	ABC transporter transmembrane region	0.02	Orthogroups_2024-Update
evm.model.tig00000741.4	No alias	(at3g62150 : 432.0) P-glycoprotein 21 (PGP21); FUNCTIONS...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004834	tryptophan synthase activity	IEP	Predicted GO
BP	GO:0006568	tryptophan metabolic process	IEP	Predicted GO
BP	GO:0006586	indolalkylamine metabolic process	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
BP	GO:0006644	phospholipid metabolic process	IEP	Predicted GO
BP	GO:0006658	phosphatidylserine metabolic process	IEP	Predicted GO
BP	GO:0006659	phosphatidylserine biosynthetic process	IEP	Predicted GO
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predicted GO
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predicted GO
BP	GO:0016042	lipid catabolic process	IEP	Predicted GO
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Predicted GO
BP	GO:0042430	indole-containing compound metabolic process	IEP	Predicted GO
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	58	327
IPR011527	ABC1_TM_dom	703	972
IPR003439	ABC_transporter-like	1043	1191
IPR003439	ABC_transporter-like	396	544

External Links

No external refs found!

GRMZM2G085236

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation