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  5. GRMZM2G085646

GRMZM2G085646


Description : photosystem I subunit F


Gene families : OG_42_0005007 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G085646
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
A4A49_36554 No alias photosystem i reaction center subunit iii, chloroplastic 0.03 Orthogroups_2024-Update
At1g31330 No alias Photosystem I reaction center subunit III, chloroplastic... 0.04 Orthogroups_2024-Update
Bradi1g06890 No alias photosystem I subunit F 0.02 Orthogroups_2024-Update
Brara.G00547.1 No alias component *(PsaF) of PS-I complex 0.04 Orthogroups_2024-Update
Brara.I02744.1 No alias component *(PsaF) of PS-I complex 0.04 Orthogroups_2024-Update
Cre09.g412100 No alias photosystem I subunit F 0.01 Orthogroups_2024-Update
Glyma.05G022900 No alias photosystem I subunit F 0.03 Orthogroups_2024-Update
HORVU5Hr1G100140.2 No alias component *(PsaF) of PS-I complex 0.05 Orthogroups_2024-Update
LOC_Os03g56670 No alias photosystem I reaction center subunit III, chloroplast... 0.02 Orthogroups_2024-Update
MA_10090427g0010 No alias (at1g31330 : 242.0) Encodes subunit F of photosystem I.;... 0.02 Orthogroups_2024-Update
Mp2g02960.1 No alias component PsaF of PS-I complex 0.02 Orthogroups_2024-Update
PSME_00056206-RA No alias (at1g31330 : 247.0) Encodes subunit F of photosystem I.;... 0.04 Orthogroups_2024-Update
Pp1s121_54V6 No alias photosystem i subunit iii 0.02 Orthogroups_2024-Update
Pp1s345_25V6 No alias photosystem i subunit iii 0.03 Orthogroups_2024-Update
Seita.9G069300.1 No alias component *(PsaF) of PS-I complex 0.05 Orthogroups_2024-Update
Sobic.001G070500.1 No alias component *(PsaF) of PS-I complex 0.05 Orthogroups_2024-Update
Solyc02g069450 No alias Photosystem I reaction center subunit III (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc02g069460 No alias Photosystem I reaction center subunit III (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen02g018590 No alias Photosystem I reaction centre subunit III 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009538 photosystem I reaction center IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003666 PSI_PsaF 57 225
No external refs found!