1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G087233

GRMZM2G087233


Description : senescence associated gene 24


Gene families : OG_42_0001900 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001900_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G087233
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
At1g14320 No alias 60S ribosomal protein L10-1... 0.03 Orthogroups_2024-Update
Glyma.02G220000 No alias Ribosomal protein L16p/L10e family protein 0.03 Orthogroups_2024-Update
Glyma.06G140900 No alias Ribosomal protein L16p/L10e family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G024710.2 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Potri.013G159600 No alias Ribosomal protein L16p/L10e family protein 0.06 Orthogroups_2024-Update
Sobic.004G103700.1 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sopen06g034040 No alias Ribosomal protein L16p/L10e 0.02 Orthogroups_2024-Update
Sopen06g034060 No alias Ribosomal protein L16p/L10e 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008915 lipid-A-disaccharide synthase activity IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0036265 RNA (guanine-N7)-methylation IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 12 166
No external refs found!