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  5. GRMZM2G087570

GRMZM2G087570


Description : cyclophilin 20-2


Gene families : OG_42_0000307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G087570
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
A4A49_61042 No alias peptidyl-prolyl cis-trans isomerase cyp20-1 0.02 Orthogroups_2024-Update
At3g62030 No alias Rotamase CYP 4 [Source:UniProtKB/TrEMBL;Acc:F4IX26] 0.02 Orthogroups_2024-Update
Bradi2g11060 No alias rotamase CYP 4 0.06 Orthogroups_2024-Update
Brara.I04288.1 No alias peptidyl-prolyl cis-trans isomerase & EC_5.2 cis-trans-isomerase 0.03 Orthogroups_2024-Update
HORVU6Hr1G050970.4 No alias peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2... 0.03 Orthogroups_2024-Update
HORVU6Hr1G092950.1 No alias EC_5.2 cis-trans-isomerase 0.03 Orthogroups_2024-Update
Kfl00085_0400 kfl00085_0400_v1.1 (at5g13120 : 254.0) Encodes a lumenal cyclophilin with... 0.03 Orthogroups_2024-Update
Mp2g15770.1 No alias protein folding catalyst 0.02 Orthogroups_2024-Update
Potri.003G167700 No alias cyclophilin 20-2 0.04 Orthogroups_2024-Update
Seita.5G034900.1 No alias peptidyl-prolyl cis-trans isomerase & EC_5.2 cis-trans-isomerase 0.03 Orthogroups_2024-Update
Sobic.009G001500.1 No alias component *(PnsL5) of NDH lumen subcomplex L &... 0.03 Orthogroups_2024-Update
Sopen01g005550 No alias Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA InterProScan predictions
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 100 246
No external refs found!