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  5. GRMZM2G087749

GRMZM2G087749


Description : binding


Gene families : OG_42_0001964 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G087749
Cluster HCCA clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
At3g06670 No alias Binding protein [Source:UniProtKB/TrEMBL;Acc:F4JC31] 0.02 Orthogroups_2024-Update
Brara.A03645.1 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 Orthogroups_2024-Update
Pp1s391_25V6 No alias Hypothetical protein C216.01c in chromosome II... 0.02 Orthogroups_2024-Update
Seita.5G158700.1 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 Orthogroups_2024-Update
Sopen01g026260 No alias Component of IIS longevity pathway SMK-1 0.03 Orthogroups_2024-Update
evm.model.tig00001408.7 No alias (at3g06670 : 149.0) binding; FUNCTIONS IN: binding;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006000 fructose metabolic process IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!