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  5. GRMZM2G088880

GRMZM2G088880


Description : Zinc-binding ribosomal protein family protein


Gene families : OG_42_0001690 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G088880
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Bradi2g17040 No alias Zinc-binding ribosomal protein family protein 0.05 Orthogroups_2024-Update
Bradi2g46580 No alias Zinc-binding ribosomal protein family protein 0.04 Orthogroups_2024-Update
Cre06.g257150 No alias Zinc-binding ribosomal protein family protein 0.05 Orthogroups_2024-Update
HORVU3Hr1G062590.1 No alias component *(eL43) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
HORVU7Hr1G081910.1 No alias component *(eL43) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Mp5g08340.1 No alias component RPL37a of LSU proteome component 0.03 Orthogroups_2024-Update
PSME_00044091-RA No alias (q5qm99|rl37a_orysa : 183.0) 60S ribosomal protein L37a... 0.02 Orthogroups_2024-Update
Potri.003G085100 No alias Zinc-binding ribosomal protein family protein 0.03 Orthogroups_2024-Update
Sobic.004G045400.1 No alias component *(eL43) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.006G047400.1 No alias component *(eL43) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.009G227400.1 No alias component *(eL43) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Solyc08g007140 No alias 60S ribosomal protein L37a (AHRD V3.3 *** RL37A_GOSHI) 0.02 Orthogroups_2024-Update
Solyc08g077720 No alias 60S ribosomal protein L37a (AHRD V3.3 *** RL37A_GOSHI) 0.04 Orthogroups_2024-Update
Sopen08g003090 No alias Ribosomal L37ae protein family 0.04 Orthogroups_2024-Update
Sopen08g026220 No alias Ribosomal L37ae protein family 0.03 Orthogroups_2024-Update
evm.model.tig00000718.64 No alias (q9xhe4|rl37a_goshi : 145.0) 60S ribosomal protein L37a... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002674 Ribosomal_L37ae 7 91
No external refs found!