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At1g24140


Description : Metalloendoproteinase 3-MMP [Source:UniProtKB/Swiss-Prot;Acc:Q5XF51]


Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g24140
Cluster HCCA clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Bradi3g59680 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Glyma.01G037200 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Glyma.02G028000 No alias Matrixin family protein 0.04 Orthogroups_2024-Update
Glyma.02G028051 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Glyma.02G028200 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
LOC_Os02g50730 No alias metalloendoproteinase 1 precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00057126-RA No alias (at1g70170 : 290.0) mutant has Late flowering; Early... 0.05 Orthogroups_2024-Update
Potri.008G027700 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Potri.008G028000 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Potri.015G103900 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Pp1s184_7V6 No alias metalloendoproteinase 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
CC GO:0031012 extracellular matrix IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 63 116
IPR001818 Pept_M10_metallopeptidase 168 329
No external refs found!