GRMZM2G089949

Description : cycling DOF factor 2

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G089949
Cluster	HCCA clusters: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
29563	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
29617	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
A4A49_00536	No alias	dof zinc finger protein dof5.7	0.04	Orthogroups_2024-Update
A4A49_12312	No alias	dof zinc finger protein dof2.1	0.04	Orthogroups_2024-Update
A4A49_15151	No alias	dof zinc finger protein dof2.4	0.03	Orthogroups_2024-Update
A4A49_16781	No alias	dof zinc finger protein dof4.6	0.03	Orthogroups_2024-Update
At1g64620	No alias	Dof zinc finger protein DOF1.8...	0.03	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.02	Orthogroups_2024-Update
Bradi1g15420	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Bradi1g17410	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Bradi2g09720	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Brara.C01888.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.F02115.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.H01664.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.H02152.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Glyma.02G108600	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.05G018100	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
Glyma.05G037800	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.06G131500	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.07G229600	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Glyma.09G237000	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.11G059300	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G062500	No alias	cycling DOF factor 2	0.06	Orthogroups_2024-Update
Glyma.13G230200	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G237500	No alias	Dof-type zinc finger DNA-binding family protein	0.05	Orthogroups_2024-Update
Glyma.15G071400	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.17G081800	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Glyma.18G260500	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.19G023200	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.19G118000	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.20G216600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G021290.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Kfl00762_0030	kfl00762_0030_v1.1	(at5g39660 : 127.0) Dof-type zinc finger...	0.01	Orthogroups_2024-Update
LOC_Os01g15900	No alias	expressed protein	0.07	Orthogroups_2024-Update
LOC_Os02g49440	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_56828g0010	No alias	(at5g02460 : 145.0) Dof-type zinc finger DNA-binding...	0.02	Orthogroups_2024-Update
PSME_00028077-RA	No alias	(at5g39660 : 211.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.05	Orthogroups_2024-Update
PSME_00056872-RA	No alias	(at5g60200 : 116.0) Encodes a Dof-type transcription...	0.03	Orthogroups_2024-Update
Potri.004G046600	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Potri.008G087800	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Potri.017G084600	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Pp1s351_46V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Seita.4G124800.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.5G052700.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Seita.6G192200.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Sobic.001G252800.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.002G236600.2	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.003G121400.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.003G253200.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc02g078620	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RD26_9ROSA)	0.02	Orthogroups_2024-Update
Solyc02g088070	No alias	Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA)	0.04	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.02	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen02g032780	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen03g034940	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen05g003730	No alias	Dof domain, zinc finger	0.05	Orthogroups_2024-Update
Sopen06g022000	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen08g031140	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen10g005150	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Predicted GO
MF	GO:0004126	cytidine deaminase activity	IEP	Predicted GO
MF	GO:0004476	mannose-6-phosphate isomerase activity	IEP	Predicted GO
MF	GO:0004602	glutathione peroxidase activity	IEP	Predicted GO
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0006216	cytidine catabolic process	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Predicted GO
BP	GO:0009119	ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0009164	nucleoside catabolic process	IEP	Predicted GO
BP	GO:0009972	cytidine deamination	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
MF	GO:0019104	DNA N-glycosylase activity	IEP	Predicted GO
MF	GO:0019239	deaminase activity	IEP	Predicted GO
CC	GO:0031012	extracellular matrix	IEP	Predicted GO
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	Predicted GO
BP	GO:0042454	ribonucleoside catabolic process	IEP	Predicted GO
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Predicted GO
CC	GO:0044421	extracellular region part	IEP	Predicted GO
BP	GO:0046087	cytidine metabolic process	IEP	Predicted GO
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0046133	pyrimidine ribonucleoside catabolic process	IEP	Predicted GO
BP	GO:0046135	pyrimidine nucleoside catabolic process	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072529	pyrimidine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901658	glycosyl compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	1	47

External Links

No external refs found!

GRMZM2G089949

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation