At1g24260

Description : At1g24260 [Source:UniProtKB/TrEMBL;Acc:B4F7R9]

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g24260
Cluster	HCCA clusters: Cluster_219

Target	Alias	Description	ECC score	Gene Family Method
A4A49_07845	No alias	agamous-like mads-box protein agl8	0.02	Orthogroups_2024-Update
At1g77950	No alias	AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6]	0.03	Orthogroups_2024-Update
At1g77980	No alias	Agamous-like MADS-box protein AGL66...	0.03	Orthogroups_2024-Update
At2g24840	No alias	Agamous-like MADS-box protein AGL61...	0.03	Orthogroups_2024-Update
At5g15800	No alias	K-box region and MADS-box transcription factor family...	0.03	Orthogroups_2024-Update
Bradi2g24940	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
Brara.B01837.1	No alias	regulatory protein *(AP1/CAL/FUL) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.C00694.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.E02241.1	No alias	MADS/AGL-type transcription factor	0.05	Orthogroups_2024-Update
Brara.I02486.1	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
Brara.J00749.1	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
Brara.K00198.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G099577	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
GRMZM2G171365	No alias	AGAMOUS-like 20	0.04	Orthogroups_2024-Update
Glyma.05G163200	No alias	K-box region and MADS-box transcription factor family protein	0.01	Orthogroups_2024-Update
Glyma.09G266400	No alias	AGAMOUS-like 6	0.03	Orthogroups_2024-Update
Glyma.10G084800	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Glyma.10G085900	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Glyma.14G183800	No alias	AGAMOUS-like 16	0.03	Orthogroups_2024-Update
Glyma.19G047600	No alias	MADS-box transcription factor family protein	0.05	Orthogroups_2024-Update
LOC_Os01g69850	No alias	OsMADS65 - MADS-box family gene with MIKC* type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g11414	No alias	OsMADS58 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g39130	No alias	OsMADS56 - MADS-box family gene with MIKCc type-box, expressed	0.03	Orthogroups_2024-Update
Mp4g12490.1	No alias	transcription factor (MADS/AGL)	0.02	Orthogroups_2024-Update
PSME_00013164-RA	No alias	(at4g11880 : 108.0) AGL12, AGL14, and AGL17 are all...	0.03	Orthogroups_2024-Update
Potri.001G058400	No alias	K-box region and MADS-box transcription factor family protein	0.04	Orthogroups_2024-Update
Potri.004G002400	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Potri.004G130900	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Potri.014G074200	No alias	AGAMOUS-like 20	0.03	Orthogroups_2024-Update
Pp1s209_130V6	No alias	mads-box transcription factor	0.02	Orthogroups_2024-Update
Pp1s55_280V6	No alias	mikc* mads-box transcription factor	0.02	Orthogroups_2024-Update
Seita.3G280400.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G086500.1	No alias	regulatory protein *(AP1/CAL/FUL) of floral meristem...	0.02	Orthogroups_2024-Update
Solyc06g035570	No alias	No description available	0.02	Orthogroups_2024-Update
Solyc06g059970	No alias	TPI	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
MF	GO:0004252	serine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004521	endoribonuclease activity	IEP	Predicted GO
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
MF	GO:0004857	enzyme inhibitor activity	IEP	Predicted GO
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
BP	GO:0006826	iron ion transport	IEP	Predicted GO
MF	GO:0016872	intramolecular lyase activity	IEP	Predicted GO
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0030234	enzyme regulator activity	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
BP	GO:0034755	iron ion transmembrane transport	IEP	Predicted GO
CC	GO:0035145	exon-exon junction complex	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
MF	GO:0098772	molecular function regulator	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	10	57
IPR002487	TF_Kbox	92	174

External Links

No external refs found!

At1g24260

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation