At1g24440


Description : F21J9.10 [Source:UniProtKB/TrEMBL;Acc:Q9FYL9]


Gene families : OG_42_0000680 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000680_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g24440
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G180900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G240800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Mp6g12970.1 No alias RING-HC-class E3 ligase 0.04 Orthogroups_2024-Update
PSME_00027883-RA No alias (at5g01520 : 323.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Sobic.001G234300.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.006G269600.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc10g009020 No alias RING finger protein (AHRD V3.3 *** A0A0B0PIZ1_GOSAR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 153 193
No external refs found!