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  5. GRMZM2G092198

GRMZM2G092198


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0009201 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009201_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G092198
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Brara.F02452.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_21580g0010 No alias (at3g49730 : 524.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Sobic.001G105400.4 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 362 409
IPR002885 Pentatricopeptide_repeat 257 306
IPR002885 Pentatricopeptide_repeat 225 255
IPR002885 Pentatricopeptide_repeat 191 218
IPR002885 Pentatricopeptide_repeat 442 467
IPR002885 Pentatricopeptide_repeat 338 360
No external refs found!