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  5. At1g25250

At1g25250


Description : IDD16 [Source:UniProtKB/TrEMBL;Acc:A0A178WG74]


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g25250
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
At4g02670 No alias Indeterminate(ID)-domain 12... 0.04 Orthogroups_2024-Update
Brara.F01854.1 No alias C2H2 subclass IDD transcription factor 0.04 Orthogroups_2024-Update
Brara.F03436.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Glyma.10G051500 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G064740.2 No alias C2H2 subclass IDD transcription factor 0.04 Orthogroups_2024-Update
Potri.008G142500 No alias indeterminate(ID)-domain 5 0.03 Orthogroups_2024-Update
Pp1s43_228V6 No alias nucleic acid binding 0.04 Orthogroups_2024-Update
Seita.7G201000.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G031800.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Solyc11g069240 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.03 Orthogroups_2024-Update
Sopen11g027970 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!