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  5. GRMZM2G094602

GRMZM2G094602


Description : Zinc finger (C3HC4-type RING finger) family protein


Gene families : OG_42_0000384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G094602
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Bradi4g43061 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
Glyma.13G324534 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
LOC_Os10g32750 No alias zinc finger family protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_15445g0010 No alias (at2g38970 : 499.0) Zinc finger (C3HC4-type RING finger)... 0.03 Orthogroups_2024-Update
MA_17431g0010 No alias (at5g60710 : 407.0) Zinc finger (C3HC4-type RING finger)... 0.03 Orthogroups_2024-Update
PSME_00032515-RA No alias (at5g60710 : 551.0) Zinc finger (C3HC4-type RING finger)... 0.02 Orthogroups_2024-Update
PSME_00047144-RA No alias (at2g38970 : 509.0) Zinc finger (C3HC4-type RING finger)... 0.02 Orthogroups_2024-Update
PSME_00049504-RA No alias (at5g60710 : 408.0) Zinc finger (C3HC4-type RING finger)... 0.02 Orthogroups_2024-Update
Sobic.001G508600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen11g028310 No alias von Willebrand factor type A domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 131 160
IPR032838 Vwaint_dom 656 728
IPR002035 VWF_A 311 492
No external refs found!