1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At1g25340

At1g25340


Description : myb domain protein 116 [Source:TAIR;Acc:AT1G25340]


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g25340
Cluster HCCA clusters: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
A4A49_12817 No alias myb-related protein pp2 0.04 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.04 Orthogroups_2024-Update
A4A49_28332 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_33530 No alias transcription factor myb26 0.03 Orthogroups_2024-Update
At1g34670 No alias Transcription factor MYB93... 0.04 Orthogroups_2024-Update
At2g31180 No alias Transcription factor MYB14... 0.03 Orthogroups_2024-Update
At5g35550 No alias Duplicated homeodomain-like superfamily protein... 0.04 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.03 Orthogroups_2024-Update
Brara.A00330.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Brara.B01779.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03395.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.C04622.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.D01054.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.04 Orthogroups_2024-Update
Brara.E03277.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03210.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.J02324.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G051528 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
GRMZM2G126566 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.08G017600 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.10G132200 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Glyma.11G009400 No alias myb domain protein 107 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.11G215800 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
Glyma.13G063200 No alias myb domain protein 30 0.03 Orthogroups_2024-Update
Glyma.13G303200 No alias myb domain protein 14 0.04 Orthogroups_2024-Update
Glyma.15G034500 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.16G007100 No alias myb domain protein 6 0.03 Orthogroups_2024-Update
Glyma.19G257400 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.20G013000 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
HORVU0Hr1G005100.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G074260.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.03 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g50770 No alias MYB family transcription factor, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os06g10350 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os09g26170 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g35390 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_2871g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_33964g0010 No alias (at5g16600 : 262.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
MA_37851g0010 No alias (at3g08500 : 182.0) Encodes a putative R2R3-type MYB... 0.04 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.03 Orthogroups_2024-Update
PSME_00028312-RA No alias (at1g66230 : 243.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.02 Orthogroups_2024-Update
PSME_00053285-RA No alias (at4g38620 : 263.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
Potri.001G224500 No alias myb domain protein 65 0.03 Orthogroups_2024-Update
Potri.004G088100 No alias myb domain protein 6 0.03 Orthogroups_2024-Update
Potri.005G112000 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.006G170800 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.009G007100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.009G018700 No alias myb domain protein 33 0.03 Orthogroups_2024-Update
Potri.013G149100 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Potri.017G128900 No alias myb domain protein 6 0.03 Orthogroups_2024-Update
Potri.019G018200 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Pp1s61_196V6 No alias myb transcription factor myb92 0.02 Orthogroups_2024-Update
Seita.2G204300.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Seita.2G289900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.02 Orthogroups_2024-Update
Seita.5G034500.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G284800.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.03 Orthogroups_2024-Update
Sobic.003G034500.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G280000.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G020200.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G224800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G112200.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc01g057910 No alias R2R3MYB transcription factor 2 0.03 Orthogroups_2024-Update
Solyc05g051550 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRU0_SALMI) 0.03 Orthogroups_2024-Update
Solyc07g008010 No alias R2R3MYB transcription factor 82 0.02 Orthogroups_2024-Update
Sopen01g001670 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen02g033980 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 20 67
IPR001005 SANT/Myb 73 116
No external refs found!