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GRMZM2G096389


Description : Cyclin/Brf1-like TBP-binding protein


Gene families : OG_42_0002615 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G096389
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Bradi1g57222 No alias Cyclin/Brf1-like TBP-binding protein 0.04 Orthogroups_2024-Update
Bradi4g39278 No alias Cyclin/Brf1-like TBP-binding protein 0.03 Orthogroups_2024-Update
Glyma.19G117700 No alias Cyclin/Brf1-like TBP-binding protein 0.04 Orthogroups_2024-Update
Mp1g16760.1 No alias component BRF1 of TFIIIb transcription factor complex 0.02 Orthogroups_2024-Update
evm.model.tig00020554.33 No alias (at2g45100 : 154.0) Cyclin/Brf1-like TBP-binding... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0017025 TBP-class protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013150 TFIIB_cyclin 79 149
IPR013150 TFIIB_cyclin 193 252
IPR011665 BRF1_TBP-bd_dom 421 521
No external refs found!