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  5. At1g26310

At1g26310


Description : Transcription factor CAULIFLOWER [Source:UniProtKB/Swiss-Prot;Acc:Q39081]


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g26310
Cluster HCCA clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
A4A49_10096 No alias mads-box protein soc1 0.06 Orthogroups_2024-Update
A4A49_14436 No alias agamous-like mads-box protein agl11 0.05 Orthogroups_2024-Update
A4A49_16645 No alias agamous-like mads-box protein agl11 0.03 Orthogroups_2024-Update
A4A49_20769 No alias agamous-like mads-box protein agl15 0.03 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.03 Orthogroups_2024-Update
A4A49_23146 No alias mads-box transcription factor 6 0.03 Orthogroups_2024-Update
At1g01530 No alias AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04] 0.03 Orthogroups_2024-Update
At1g77980 No alias Agamous-like MADS-box protein AGL66... 0.03 Orthogroups_2024-Update
At2g24840 No alias Agamous-like MADS-box protein AGL61... 0.04 Orthogroups_2024-Update
At2g45660 No alias SOC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZL4] 0.04 Orthogroups_2024-Update
At3g61120 No alias Agamous-like MADS-box protein AGL13... 0.05 Orthogroups_2024-Update
At4g22950 No alias Agamous-like MADS-box protein AGL19... 0.04 Orthogroups_2024-Update
Bradi1g08340 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi2g57000 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi2g59119 No alias AGAMOUS-like 14 0.02 Orthogroups_2024-Update
Brara.B03768.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D00221.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J01588.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.03 Orthogroups_2024-Update
Brara.J01932.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.05 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.02 Orthogroups_2024-Update
Glyma.13G034100 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.20G136700 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
HORVU0Hr1G003020.3 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
LOC_Os04g49150 No alias OsMADS17 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g01820 No alias OsMADS15 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g21880 No alias OsMADS74 - MADS-box family gene with M-alpha type-box, expressed 0.02 Orthogroups_2024-Update
Potri.001G112400 No alias AGAMOUS-like 19 0.05 Orthogroups_2024-Update
Potri.001G284301 No alias AGAMOUS-like 21 0.03 Orthogroups_2024-Update
Potri.004G064300 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Seita.1G273400.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Seita.4G177800.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g093960 No alias MADS-box transcription factor (AHRD V3.3 *** A0A072TNM9_MEDTR) 0.03 Orthogroups_2024-Update
Solyc03g114830 No alias FRUITFULL-like MADS-box 2 0.03 Orthogroups_2024-Update
Solyc06g059970 No alias TPI 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 85 174
No external refs found!