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GRMZM2G099186


Description : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain


Gene families : OG_42_0002115 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002115_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G099186
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Bradi2g37640 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.03 Orthogroups_2024-Update
Potri.006G215200 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 13 74
IPR001878 Znf_CCHC 124 140
IPR001878 Znf_CCHC 103 118
No external refs found!