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  5. GRMZM2G099187

GRMZM2G099187


Description : SEUSS-like 2


Gene families : OG_42_0001027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G099187
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G146200 No alias SEUSS-like 2 0.03 Orthogroups_2024-Update
Potri.002G072900 No alias SEUSS transcriptional co-regulator 0.04 Orthogroups_2024-Update
Potri.012G136100 No alias SEUSS-like 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 233 492
No external refs found!