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  5. GRMZM2G099657

GRMZM2G099657


Description : 40s ribosomal protein SA B


Gene families : OG_42_0001668 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G099657
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
36118 No alias 40s ribosomal protein SA 0.02 Orthogroups_2024-Update
Bradi1g60310 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Brara.G03124.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Glyma.07G043800 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Glyma.08G159800 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Glyma.15G267100 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Glyma.16G012200 No alias 40s ribosomal protein SA B 0.04 Orthogroups_2024-Update
HORVU2Hr1G030880.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
HORVU4Hr1G077240.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Potri.003G071200 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Potri.012G117600 No alias 40s ribosomal protein SA B 0.02 Orthogroups_2024-Update
Potri.015G112900 No alias 40s ribosomal protein SA 0.03 Orthogroups_2024-Update
Seita.2G389700.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Seita.9G371600.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Seita.9G517100.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sobic.002G375100.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.005G229300.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Solyc06g072120 No alias 40S ribosomal protein SA (AHRD V3.3 *** K4C8T4_SOLLC) 0.04 Orthogroups_2024-Update
Sopen03g029850 No alias Ribosomal protein S2 0.04 Orthogroups_2024-Update
Sopen06g028410 No alias Ribosomal protein S2 0.03 Orthogroups_2024-Update
evm.model.contig_4456.25 No alias (o22518|rssa_soybn : 282.0) 40S ribosomal protein SA... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 23 117
IPR001865 Ribosomal_S2 122 187
No external refs found!