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  5. GRMZM2G100913

GRMZM2G100913


Description : IBR domain-containing protein


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G100913
Cluster HCCA clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Bradi1g69300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g41760 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Bradi3g48130 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Bradi4g35080 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Brara.A00383.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G055260.4 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Mp2g00810.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Potri.002G131200 No alias IBR domain-containing protein 0.02 Orthogroups_2024-Update
Seita.6G230200.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G148700.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.9G483400.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.006G131000.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.007G185900.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 212 273
IPR002867 IBR_dom 290 338
No external refs found!