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  5. GRMZM2G103055

GRMZM2G103055


Description : alpha-amylase-like


Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G103055
Cluster HCCA clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G091250.3 No alias alpha amylase 0.02 Orthogroups_2024-Update
MA_30833g0020 No alias (p27933|amy3d_orysa : 533.0) Alpha-amylase isozyme 3D... 0.02 Orthogroups_2024-Update
Mp1g24800.1 No alias alpha amylase 0.02 Orthogroups_2024-Update
Mp2g22120.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
PSME_00011482-RA No alias (p27933|amy3d_orysa : 429.0) Alpha-amylase isozyme 3D... 0.02 Orthogroups_2024-Update
Seita.1G331000.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
Seita.2G230000.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
Sobic.002G190500.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
Solyc04g078930 No alias Alpha-amylase (AHRD V3.3 *** K4BUX7_SOLLC) 0.03 Orthogroups_2024-Update
evm.model.contig_2050.12 No alias (at1g69830 : 347.0) Encodes a plastid-localized... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0004556 alpha-amylase activity IEA InterProScan predictions
MF GO:0005509 calcium ion binding IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 420 478
IPR006047 Glyco_hydro_13_cat_dom 101 263
No external refs found!