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  5. GRMZM2G104047

GRMZM2G104047


Description : Function unknown


Gene families : OG_42_0007926 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G104047
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
At5g53440 No alias LOW protein: zinc finger CCCH domain protein... 0.03 Orthogroups_2024-Update
Brara.C01391.1 No alias regulatory component *(HIZ2) of adenosine... 0.03 Orthogroups_2024-Update
Glyma.04G236700 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.06G127600 No alias Function unknown 0.04 Orthogroups_2024-Update
LOC_Os01g46710 No alias transposon protein, putative, CACTA, En/Spm sub-class, expressed 0.02 Orthogroups_2024-Update
MA_20304g0010 No alias (at5g53440 : 123.0) unknown protein; FUNCTIONS IN:... 0.06 Orthogroups_2024-Update
MA_93646g0010 No alias (at5g53440 : 105.0) unknown protein; FUNCTIONS IN:... 0.05 Orthogroups_2024-Update
Mp7g05580.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Seita.5G248400.1 No alias regulatory component *(HIZ2) of adenosine... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!