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  5. GRMZM2G104262

GRMZM2G104262


Description : cryptochrome 1


Gene families : OG_42_0001675 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G104262
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
Brara.I02459.1 No alias cryptochrome photoreceptor *(CRY) 0.03 Orthogroups_2024-Update
Glyma.13G089200 No alias cryptochrome 1 0.05 Orthogroups_2024-Update
Glyma.14G174200 No alias cryptochrome 1 0.05 Orthogroups_2024-Update
Potri.008G166632 No alias cryptochrome 2 0.03 Orthogroups_2024-Update
Seita.7G119400.1 No alias cryptochrome photoreceptor *(CRY) 0.04 Orthogroups_2024-Update
Sobic.004G188400.1 No alias cryptochrome photoreceptor *(CRY) 0.04 Orthogroups_2024-Update
Sobic.006G101600.1 No alias cryptochrome photoreceptor *(CRY) 0.03 Orthogroups_2024-Update
Solyc04g074180 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
Sopen04g029360 No alias FAD binding domain of DNA photolyase 0.03 Orthogroups_2024-Update
Sopen12g029700 No alias FAD binding domain of DNA photolyase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009439 cyanate metabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR020978 Cryptochrome_C 522 645
IPR005101 Cryptochr/Photolyase_FAD-bd 295 490
IPR006050 DNA_photolyase_N 18 174
No external refs found!