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  5. GRMZM2G104505

GRMZM2G104505


Description : vesicle-associated membrane protein 726


Gene families : OG_42_0000264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G104505
Cluster HCCA clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Bradi1g54680 No alias vesicle-associated membrane protein 726 0.02 Orthogroups_2024-Update
Brara.D00474.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 Orthogroups_2024-Update
Cre04.g225850 No alias vesicle-associated membrane protein 727 0.02 Orthogroups_2024-Update
GRMZM2G054193 No alias vesicle-associated membrane protein 726 0.03 Orthogroups_2024-Update
Glyma.17G111000 No alias vesicle-associated membrane protein 713 0.03 Orthogroups_2024-Update
Potri.010G239900 No alias vesicle-associated membrane protein 727 0.04 Orthogroups_2024-Update
Pp1s219_102V6 No alias vesicle-associated membrane 0.02 Orthogroups_2024-Update
Seita.9G049300.1 No alias R-type component *(VAMP721/VAMP722) of SNARE cell-plate... 0.03 Orthogroups_2024-Update
Sobic.002G068300.1 No alias R-type component *(VAMP721/VAMP722) of SNARE cell-plate... 0.02 Orthogroups_2024-Update
Sobic.004G334900.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.02 Orthogroups_2024-Update
Solyc06g074250 No alias Vesicle-associated membrane protein, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010908 Longin_dom 3 50
IPR001388 Synaptobrevin 68 154
No external refs found!