GRMZM2G104955

Description : Topoisomerase II-associated protein PAT1

Gene families : OG_42_0001618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001618_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G104955
Cluster	HCCA clusters: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
Mp4g14040.1	No alias	mRNA decay factor (PAT1)	0.03	Orthogroups_2024-Update
Potri.006G021900	No alias	Topoisomerase II-associated protein PAT1	0.02	Orthogroups_2024-Update
Seita.3G183300.1	No alias	mRNA decay factor *(PAT1)	0.03	Orthogroups_2024-Update
Sobic.003G309200.1	No alias	mRNA decay factor *(PAT1)	0.03	Orthogroups_2024-Update
Sobic.004G131300.1	No alias	mRNA decay factor *(PAT1)	0.03	Orthogroups_2024-Update
Sopen12g002360	No alias	hypothetical protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Predicted GO
MF	GO:0003682	chromatin binding	IEP	Predicted GO
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Predicted GO
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Predicted GO
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Predicted GO
BP	GO:0006338	chromatin remodeling	IEP	Predicted GO
MF	GO:0008565	protein transporter activity	IEP	Predicted GO
MF	GO:0031491	nucleosome binding	IEP	Predicted GO
MF	GO:0032977	membrane insertase activity	IEP	Predicted GO
BP	GO:0043044	ATP-dependent chromatin remodeling	IEP	Predicted GO
CC	GO:0044459	plasma membrane part	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
CC	GO:0098797	plasma membrane protein complex	IEP	Predicted GO

No InterPro domains available for this sequence

External Links

No external refs found!