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GRMZM2G107362


Description : regulatory particle triple-A ATPase 6A


Gene families : OG_42_0003229 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G107362
Cluster HCCA clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
177014 No alias regulatory particle triple-A ATPase 6A 0.02 Orthogroups_2024-Update
Bradi1g36830 No alias regulatory particle triple-A ATPase 6A 0.04 Orthogroups_2024-Update
Cre04.g216600 No alias regulatory particle triple-A ATPase 6A 0.02 Orthogroups_2024-Update
MA_10427013g0010 No alias (at5g19990 : 730.0) 26S proteasome AAA-ATPase subunit;... 0.02 Orthogroups_2024-Update
Mp1g04290.1 No alias regulatory component RPT6 of 26S proteasome 0.04 Orthogroups_2024-Update
evm.model.tig00000792.28 No alias (at5g19990 : 630.0) 26S proteasome AAA-ATPase subunit;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0007033 vacuole organization IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:1905037 autophagosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 201 334
IPR032501 Prot_ATP_ID_OB 88 143
No external refs found!