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  5. GRMZM2G107491

GRMZM2G107491


Description : zinc finger protein 1


Gene families : OG_42_0000464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G107491
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_10593 No alias zinc finger ccch domain-containing protein zfn-like protein 0.03 Orthogroups_2024-Update
At3g02830 No alias Zinc finger CCCH domain-containing protein 33... 0.05 Orthogroups_2024-Update
Bradi4g19010 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
Brara.C01681.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Brara.C03010.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Brara.E00011.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Glyma.10G170800 No alias zinc finger protein 1 0.02 Orthogroups_2024-Update
Glyma.14G050000 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Orthogroups_2024-Update
Glyma.18G241300 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
LOC_Os01g68860 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g21700 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.02 Orthogroups_2024-Update
PSME_00001974-RA No alias (q9swf9|zfnl_pea : 135.0) Zinc finger CCCH... 0.02 Orthogroups_2024-Update
Potri.019G053200 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
Seita.8G116700.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Sobic.005G111700.1 No alias regulatory protein of RNA homeostasis 0.04 Orthogroups_2024-Update
Solyc11g008900 No alias Zinc finger transcription factor 65 0.03 Orthogroups_2024-Update
Sopen11g004680 No alias Zinc finger C-x8-C-x5-C-x3-H type (and similar) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 71 96
IPR000571 Znf_CCCH 360 384
IPR000571 Znf_CCCH 117 141
IPR000571 Znf_CCCH 314 339
IPR000571 Znf_CCCH 163 187
No external refs found!