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At1g27740


Description : Transcription factor bHLH54 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEG1]


Gene families : OG_42_0000539 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g27740
Cluster HCCA clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
409967 No alias RHD SIX-LIKE 1 0.02 Orthogroups_2024-Update
413232 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.04 Orthogroups_2024-Update
At1g66470 No alias RHD6 [Source:UniProtKB/TrEMBL;Acc:A0A178W430] 0.04 Orthogroups_2024-Update
Glyma.14G069700 No alias RHD SIX-LIKE 1 0.04 Orthogroups_2024-Update
Pp1s60_187V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.5G075100.1 No alias bHLH-type transcription factor 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 183 223
No external refs found!