Solyc03g026270

Description : CBF

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc03g026270
Cluster	HCCA clusters: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
A4A49_20397	No alias	dehydration-responsive element-binding protein 2d	0.03	Orthogroups_2024-Update
A4A49_20472	No alias	ethylene-responsive transcription factor 13	0.03	Orthogroups_2024-Update
A4A49_24041	No alias	ethylene-responsive transcription factor 1a	0.03	Orthogroups_2024-Update
A4A49_28100	No alias	ethylene-responsive transcription factor erf017	0.03	Orthogroups_2024-Update
A4A49_36835	No alias	ethylene-responsive transcription factor 5	0.04	Orthogroups_2024-Update
At1g15360	No alias	Ethylene-responsive transcription factor WIN1...	0.03	Orthogroups_2024-Update
At3g16770	No alias	Ethylene-responsive transcription factor RAP2-3...	0.03	Orthogroups_2024-Update
At4g25480	No alias	Dehydration-responsive element-binding protein 1A...	0.03	Orthogroups_2024-Update
At5g25390	No alias	SHN3 [Source:UniProtKB/TrEMBL;Acc:A0A178USD7]	0.03	Orthogroups_2024-Update
Brara.B00844.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
Brara.G00521.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.H01375.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.I01985.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G069082	No alias	C-repeat-binding factor 4	0.03	Orthogroups_2024-Update
GRMZM2G307152	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.07G110000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.10G007000	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.10G187000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G060600	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.13G122500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G233800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.15G018400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.17G216100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G048870.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
HORVU1Hr1G070410.3	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os07g22730	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g06770	No alias	ethylene-responsive transcription factor ERF110,...	0.02	Orthogroups_2024-Update
MA_10435354g0010	No alias	(at1g19210 : 88.6) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
MA_201698g0010	No alias	(at5g11590 : 124.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
PSME_00003641-RA	No alias	(at3g14230 : 136.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
Potri.006G163400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.013G045200	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Potri.014G126100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.016G053200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s162_92V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s259_97V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G270800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.4G180800.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G081300.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Sobic.002G212000.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Sobic.004G295700.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G051200.2	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G058732.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G184700.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Solyc02g067020	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc02g077840	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.04	Orthogroups_2024-Update
Solyc03g124110	No alias	CBF	0.03	Orthogroups_2024-Update
Solyc05g051180	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.04	Orthogroups_2024-Update
Solyc05g052040	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc05g052050	No alias	DNA-binding protein Pti4	0.03	Orthogroups_2024-Update
Solyc06g063070	No alias	Ethylene Response Factor A.3	0.03	Orthogroups_2024-Update
Solyc06g068830	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc08g078420	No alias	ethylene-responsive transcription factor (AHRD V3.3 -...	0.06	Orthogroups_2024-Update
Solyc08g081960	No alias	Solanum Lycopersicum Cytokinin Response Factor 2	0.04	Orthogroups_2024-Update
Solyc09g066360	No alias	Ethylene Response Factor C.3	0.03	Orthogroups_2024-Update
Solyc09g089910	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc10g050960	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc11g012980	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc12g042210	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Sopen02g022270	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen04g006170	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015693	magnesium ion transport	IEP	Predicted GO
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Predicted GO
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
MF	GO:0048038	quinone binding	IEP	Predicted GO
MF	GO:0050661	NADP binding	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
BP	GO:0070838	divalent metal ion transport	IEP	Predicted GO
BP	GO:0072511	divalent inorganic cation transport	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	49	99

External Links

No external refs found!

Solyc03g026270

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation