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GRMZM2G108677


Description : RNA-binding KH domain-containing protein


Gene families : OG_42_0000701 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000701_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G108677
Cluster HCCA clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
107444 No alias RNA-binding KH domain-containing protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G001050.1 No alias STAR-type post-transcriptionally regulatory factor 0.03 Orthogroups_2024-Update
HORVU0Hr1G001300.1 No alias STAR-type post-transcriptionally regulatory factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G069380.3 No alias STAR-type post-transcriptionally regulatory factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G111540.3 No alias STAR-type post-transcriptionally regulatory factor 0.03 Orthogroups_2024-Update
LOC_Os05g40290 No alias KH domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.1G300900.1 No alias STAR-type post-transcriptionally regulatory factor 0.03 Orthogroups_2024-Update
Seita.5G406800.1 No alias STAR-type post-transcriptionally regulatory factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032377 STAR_dimer 23 73
IPR004088 KH_dom_type_1 136 180
No external refs found!