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Description : tubulin beta 8
Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G108766 | |
| Cluster | HCCA clusters: Cluster_195 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 164404 | No alias | tubulin beta chain 2 | 0.02 | Orthogroups_2024-Update | |
| 23468 | No alias | tubulin beta 8 | 0.02 | Orthogroups_2024-Update | |
| 79202 | No alias | tubulin beta chain 2 | 0.03 | Orthogroups_2024-Update | |
| A4A49_21669 | No alias | tubulin beta-2 chain | 0.02 | Orthogroups_2024-Update | |
| At5g44340 | No alias | Tubulin beta-4 chain [Source:UniProtKB/Swiss-Prot;Acc:P24636] | 0.02 | Orthogroups_2024-Update | |
| Bradi1g13090 | No alias | tubulin beta chain 4 | 0.03 | Orthogroups_2024-Update | |
| Bradi2g21340 | No alias | beta-6 tubulin | 0.03 | Orthogroups_2024-Update | |
| Brara.A01134.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| Brara.A02439.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| Brara.B02782.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.03 | Orthogroups_2024-Update | |
| Brara.F01786.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| Brara.J02165.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.04 | Orthogroups_2024-Update | |
| Cre12.g542250 | No alias | tubulin beta chain 2 | 0.01 | Orthogroups_2024-Update | |
| Cre12.g549550 | No alias | tubulin beta chain 2 | 0.01 | Orthogroups_2024-Update | |
| Glyma.08G054000 | No alias | beta-6 tubulin | 0.02 | Orthogroups_2024-Update | |
| Kfl00215_0220 | kfl00215_0220_v1.1 | (p04690|tbb_chlre : 826.0) Tubulin beta-1/beta-2 chain -... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os02g07060 | No alias | tubulin/FtsZ domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g01530 | No alias | tubulin/FtsZ domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_230579g0020 | No alias | (q76fs3|tbb6_orysa : 573.0) Tubulin beta-6 chain (Beta-6... | 0.04 | Orthogroups_2024-Update | |
| Mp1g20730.1 | No alias | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.03 | Orthogroups_2024-Update | |
| Mp2g09390.1 | No alias | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.03 | Orthogroups_2024-Update | |
| Mp2g16780.1 | No alias | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.03 | Orthogroups_2024-Update | |
| Potri.006G095000 | No alias | tubulin beta 8 | 0.03 | Orthogroups_2024-Update | |
| Potri.009G067100 | No alias | beta-6 tubulin | 0.05 | Orthogroups_2024-Update | |
| Potri.009G067200 | No alias | beta-6 tubulin | 0.03 | Orthogroups_2024-Update | |
| Potri.011G162500 | No alias | tubulin beta 8 | 0.03 | Orthogroups_2024-Update | |
| Pp1s252_101V6 | No alias | tubulin beta | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G069800.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G328800.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| Sopen10g031450 | No alias | Tubulin/FtsZ family, GTPase domain | 0.02 | Orthogroups_2024-Update | |
| evm.model.contig_2073.5 | No alias | (p37832|tbb7_orysa : 682.0) Tubulin beta-7 chain (Beta-7... | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00001067.6 | No alias | (p04690|tbb_chlre : 752.0) Tubulin beta-1/beta-2 chain -... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| BP | GO:0006413 | translational initiation | IEP | Predicted GO |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| No external refs found! |