GRMZM2G109284

Description : SART-1 family

Gene families : OG_42_0002097 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002097_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G109284
Cluster	HCCA clusters: Cluster_229

Target	Alias	Description	ECC score	Gene Family Method
Bradi5g21986	No alias	Function unknown	0.04	Orthogroups_2024-Update
Glyma.08G229600	No alias	SART-1 family	0.03	Orthogroups_2024-Update
Kfl00183_0130	kfl00183_0130_v1.1	(at5g16780 : 273.0) Encodes a protein belonging to...	0.01	Orthogroups_2024-Update
Mp8g09130.1	No alias	SART-1 family protein DOT2 OS=Arabidopsis thaliana...	0.02	Orthogroups_2024-Update
Pp1s99_235V6	No alias	hypoxia associated factor	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	IEA	InterProScan predictions
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005011	SNU66/SART1	156	676
IPR005011	SNU66/SART1	692	738

External Links

No external refs found!