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  5. GRMZM2G110192

GRMZM2G110192


Description : nine-cis-epoxycarotenoid dioxygenase 4


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G110192
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
272067 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
At3g24220 No alias 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi3g52680 No alias nine-cis-epoxycarotenoid dioxygenase 4 0.03 Orthogroups_2024-Update
Brara.C03527.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Brara.D00005.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.04 Orthogroups_2024-Update
HORVU6Hr1G068720.4 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.03 Orthogroups_2024-Update
LOC_Os03g44380 No alias 9-cis-epoxycarotenoid dioxygenase 1, chloroplast... 0.02 Orthogroups_2024-Update
LOC_Os12g44310 No alias carotenoid cleavage dioxygenase, putative, expressed 0.06 Orthogroups_2024-Update
Mp7g12990.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.04 Orthogroups_2024-Update
Pp1s12_317V6 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
Pp1s132_26V6 No alias carotenoid cleavage dioxygenase 0.03 Orthogroups_2024-Update
Seita.1G288400.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.04 Orthogroups_2024-Update
Sobic.004G268500.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.05 Orthogroups_2024-Update
evm.model.tig00001071.14 No alias (at3g63520 : 102.0) Encodes a protein with... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0045048 protein insertion into ER membrane IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 155 628
No external refs found!