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  5. GRMZM2G110309

GRMZM2G110309


Description : TRF-like 2


Gene families : OG_42_0001495 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001495_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G110309
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
A4A49_34234 No alias telomere repeat-binding protein 3 0.03 Orthogroups_2024-Update
At3g46590 No alias Telomere repeat-binding protein 2... 0.03 Orthogroups_2024-Update
Bradi1g66677 No alias TRF-like 2 0.03 Orthogroups_2024-Update
Brara.C00585.1 No alias telomeric dsDNA-binding protein 0.04 Orthogroups_2024-Update
Brara.J01319.1 No alias telomeric dsDNA-binding protein 0.03 Orthogroups_2024-Update
Glyma.11G138700 No alias TRF-like 2 0.03 Orthogroups_2024-Update
Glyma.18G037900 No alias TRF-like 9 0.03 Orthogroups_2024-Update
PSME_00015336-RA No alias (at1g07540 : 197.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00033676-RA No alias (at3g12560 : 236.0) Encodes a telomeric DNA-binding... 0.04 Orthogroups_2024-Update
Potri.001G241600 No alias TRF-like 2 0.05 Orthogroups_2024-Update
Seita.1G040800.1 No alias telomeric dsDNA-binding protein 0.03 Orthogroups_2024-Update
Seita.9G453400.1 No alias telomeric dsDNA-binding protein 0.05 Orthogroups_2024-Update
Sobic.001G421500.1 No alias telomeric dsDNA-binding protein 0.03 Orthogroups_2024-Update
Sopen05g032900 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009439 cyanate metabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!