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  5. GRMZM2G111136

GRMZM2G111136


Description : squamosa promoter binding protein-like 8


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G111136
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cre16.g686100 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.01 Orthogroups_2024-Update
Glyma.19G146000 No alias squamosa promoter binding protein-like 9 0.02 Orthogroups_2024-Update
PSME_00041406-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Solyc02g077920 No alias Colorless non-ripening 0.02 Orthogroups_2024-Update
Sopen04g017460 No alias SBP domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 211 284
No external refs found!