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GRMZM2G113078


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G113078
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
98831 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
A4A49_10848 No alias ethylene-responsive transcription factor rap2-7 0.02 Orthogroups_2024-Update
Bradi3g36820 No alias ARIA-interacting double AP2 domain protein 0.03 Orthogroups_2024-Update
Glyma.05G091200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G227700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G053800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G044400 No alias related to AP2.7 0.05 Orthogroups_2024-Update
HORVU2Hr1G113880.23 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
LOC_Os02g40070 No alias AP2-like ethylene-responsive transcription factor... 0.03 Orthogroups_2024-Update
PSME_00036178-RA No alias (at4g18520 : 129.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
Potri.001G018400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G140700 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Potri.016G084500 No alias related to AP2.7 0.02 Orthogroups_2024-Update
Seita.6G164700.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Sobic.001G036800.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Sobic.009G124200.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Solyc02g092050 No alias AP2-like ethylene-responsive transcription factor (AHRD... 0.02 Orthogroups_2024-Update
Solyc06g075510 No alias APETALA2e 0.02 Orthogroups_2024-Update
Solyc09g007260 No alias AP2-like ethylene-responsive transcription factor (AHRD... 0.03 Orthogroups_2024-Update
Solyc11g010710 No alias AP2-like ethylene-responsive transcription factor (AHRD... 0.02 Orthogroups_2024-Update
Sopen01g040570 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen06g025830 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 179 230
IPR001471 AP2/ERF_dom 77 136
No external refs found!