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GRMZM2G113815


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G113815
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Brara.C03174.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.G01955.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.H02383.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc06g060170 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G33440.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 136 420
No external refs found!