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  5. GRMZM2G113888

GRMZM2G113888


Description : TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G113888
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
At2g45680 No alias Transcription factor TCP9... 0.04 Orthogroups_2024-Update
Brara.B01992.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C02306.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D01115.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G095400.2 No alias circadian clock activation factor *(TCP20) & TCP-type... 0.04 Orthogroups_2024-Update
HORVU7Hr1G038130.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g69980 No alias TCP family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Seita.1G246200.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Seita.1G376200.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.02 Orthogroups_2024-Update
Sobic.003G408400.1 No alias circadian clock activation factor *(TCP20) & TCP-type... 0.03 Orthogroups_2024-Update
Sobic.010G092100.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc02g094290 No alias TCP transcription factor 27 0.04 Orthogroups_2024-Update
Sopen11g010700 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
MF GO:0051011 microtubule minus-end binding IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 57 229
No external refs found!