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  5. GRMZM2G115480

GRMZM2G115480


Description : Function unknown


Gene families : OG_42_0003548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G115480
Cluster HCCA clusters: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
A4A49_02207 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi5g09310 No alias Function unknown 0.06 Orthogroups_2024-Update
Brara.D00576.1 No alias regulatory protein *(BIC) of cryptochrome signalling 0.04 Orthogroups_2024-Update
Glyma.10G072000 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.13G153400 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.19G194900 No alias Function unknown 0.02 Orthogroups_2024-Update
Potri.009G163900 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.7G090200.1 No alias regulatory protein *(BIC) of cryptochrome signalling 0.03 Orthogroups_2024-Update
Sobic.004G165500.1 No alias regulatory protein *(BIC) of cryptochrome signalling 0.06 Orthogroups_2024-Update
Sobic.006G068900.2 No alias regulatory protein *(BIC) of cryptochrome signalling 0.03 Orthogroups_2024-Update
Sopen09g004160 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!