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Description : phytochrome interacting factor 3
Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G115960 | |
| Cluster | HCCA clusters: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 39143 | No alias | phytochrome interacting factor 3 | 0.02 | Orthogroups_2024-Update | |
| At2g20180 | No alias | Transcription factor PIF1... | 0.03 | Orthogroups_2024-Update | |
| At2g43010 | No alias | phytochrome interacting factor 4 [Source:TAIR;Acc:AT2G43010] | 0.02 | Orthogroups_2024-Update | |
| Brara.C04242.1 | No alias | bHLH-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Brara.H01713.1 | No alias | bHLH-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Brara.I04061.1 | No alias | regulatory protein *(PIF) of red/far-red light... | 0.02 | Orthogroups_2024-Update | |
| Brara.I05268.1 | No alias | regulatory protein *(PIF) of red/far-red light... | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G016756 | No alias | phytochrome interacting factor 4 | 0.04 | Orthogroups_2024-Update | |
| Glyma.10G042800 | No alias | phytochrome interacting factor 3-like 5 | 0.03 | Orthogroups_2024-Update | |
| Glyma.10G138800 | No alias | phytochrome interacting factor 3-like 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G115700 | No alias | phytochrome interacting factor 4 | 0.02 | Orthogroups_2024-Update | |
| PSME_00038811-RA | No alias | (at1g09530 : 147.0) Transcription factor interacting... | 0.02 | Orthogroups_2024-Update | |
| Potri.002G055400 | No alias | phytochrome interacting factor 4 | 0.02 | Orthogroups_2024-Update | |
| Potri.002G124400 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.014G111400 | No alias | phytochrome interacting factor 3 | 0.02 | Orthogroups_2024-Update | |
| Seita.1G357300.1 | No alias | bHLH-type transcription factor | 0.04 | Orthogroups_2024-Update | |
| Seita.9G160700.1 | No alias | regulatory protein *(PIF) of red/far-red light... | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G068301.1 | No alias | bHLH-type transcription factor | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008146 | sulfotransferase activity | IEP | Predicted GO |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
| BP | GO:0009439 | cyanate metabolic process | IEP | Predicted GO |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Predicted GO |
| MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 356 | 402 |
| No external refs found! |