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  5. GRMZM2G116282

GRMZM2G116282


Description : Hyaluronan / mRNA binding family


Gene families : OG_42_0001353 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001353_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G116282
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Bradi2g18860 No alias Hyaluronan / mRNA binding family 0.05 Orthogroups_2024-Update
Bradi2g48500 No alias Hyaluronan / mRNA binding family 0.1 Orthogroups_2024-Update
Brara.A00883.1 No alias regulatory protein *(RGG) of mRNA quality control 0.07 Orthogroups_2024-Update
Brara.B02951.1 No alias regulatory protein *(RGG) of mRNA quality control 0.09 Orthogroups_2024-Update
Brara.C04556.1 No alias regulatory protein *(RGG) of mRNA quality control 0.09 Orthogroups_2024-Update
Brara.H00932.1 No alias regulatory protein *(RGG) of mRNA quality control 0.08 Orthogroups_2024-Update
Brara.I01982.1 No alias regulatory protein *(RGG) of mRNA quality control 0.09 Orthogroups_2024-Update
Glyma.07G114600 No alias Hyaluronan / mRNA binding family 0.03 Orthogroups_2024-Update
Glyma.18G251400 No alias Hyaluronan / mRNA binding family 0.03 Orthogroups_2024-Update
Potri.001G153000 No alias Hyaluronan / mRNA binding family 0.04 Orthogroups_2024-Update
Seita.3G124100.1 No alias regulatory protein *(RGG) of mRNA quality control 0.06 Orthogroups_2024-Update
Seita.5G216700.1 No alias regulatory protein *(RGG) of mRNA quality control 0.04 Orthogroups_2024-Update
Sobic.003G211100.1 No alias regulatory protein *(RGG) of mRNA quality control 0.07 Orthogroups_2024-Update
Sobic.003G279800.1 No alias regulatory protein *(RGG) of mRNA quality control 0.04 Orthogroups_2024-Update
Sobic.009G253400.1 No alias regulatory protein *(RGG) of mRNA quality control 0.03 Orthogroups_2024-Update
Solyc08g007220 No alias Nuclear RNA binding protein-like (AHRD V3.3 *** Q38M48_SOLTU) 0.16 Orthogroups_2024-Update
Sopen08g003170 No alias Hyaluronan / mRNA binding family 0.04 Orthogroups_2024-Update
Sopen08g003180 No alias Hyaluronan / mRNA binding family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006861 HABP4_PAIRBP1-bd 159 271
IPR019084 Stm1-like_N 1 78
No external refs found!