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  5. GRMZM2G116646

GRMZM2G116646


Description : Plant-specific transcription factor YABBY family protein


Gene families : OG_42_0000538 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000538_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G116646
Cluster HCCA clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G308900 No alias Plant-specific transcription factor YABBY family protein 0.02 Orthogroups_2024-Update
Potri.006G067800 No alias plant-specific transcription factor YABBY family protein 0.03 Orthogroups_2024-Update
Sobic.008G176300.1 No alias transcription factor *(YABBY) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009411 response to UV IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006780 YABBY 8 179
No external refs found!