1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G118005

GRMZM2G118005


Description : Translation elongation factor EF1B/ribosomal protein S6 family protein


Gene families : OG_42_0007385 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007385_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G118005
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
58368 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.02 Orthogroups_2024-Update
A4A49_03704 No alias 30s ribosomal protein s6 alpha, chloroplastic 0.06 Orthogroups_2024-Update
A4A49_12743 No alias 30s ribosomal protein s6 alpha, chloroplastic 0.06 Orthogroups_2024-Update
Bradi1g02030 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.06 Orthogroups_2024-Update
Brara.I01293.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Brara.I01316.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Cre12.g520600 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.07 Orthogroups_2024-Update
HORVU5Hr1G120250.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Kfl00077_0230 kfl00077_0230_v1.1 (p82403|rr6_spiol : 125.0) 30S ribosomal protein S6... 0.05 Orthogroups_2024-Update
Mp4g07210.1 No alias component psRPS6 of small ribosomal subunit proteome 0.02 Orthogroups_2024-Update
Potri.001G088300 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.05 Orthogroups_2024-Update
Pp1s24_129V6 No alias ribosomal protein s6 0.02 Orthogroups_2024-Update
Pp1s359_29V6 No alias ribosomal protein s6 0.04 Orthogroups_2024-Update
Seita.9G016600.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.1 Orthogroups_2024-Update
Sobic.001G017000.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Solyc08g082690 No alias Ribosomal protein S6 (AHRD V3.3 *** A0A103XFW4_CYNCS) 0.04 Orthogroups_2024-Update
Sopen08g030910 No alias Ribosomal protein S6 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
MF GO:0019843 rRNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0007088 regulation of mitotic nuclear division IEP Predicted GO
BP GO:0007346 regulation of mitotic cell cycle IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
CC GO:0009349 riboflavin synthase complex IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
BP GO:0033045 regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0051783 regulation of nuclear division IEP Predicted GO
BP GO:0051983 regulation of chromosome segregation IEP Predicted GO
BP GO:0090231 regulation of spindle checkpoint IEP Predicted GO
BP GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint IEP Predicted GO
BP GO:1901976 regulation of cell cycle checkpoint IEP Predicted GO
BP GO:1901987 regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1903504 regulation of mitotic spindle checkpoint IEP Predicted GO
BP GO:1905818 regulation of chromosome separation IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 116 215
No external refs found!