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Description : RING/U-box superfamily protein
Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G118344 | |
| Cluster | HCCA clusters: Cluster_99 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi2g34660 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.07G214600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.12G158500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G061010.9 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g47740 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g47670 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| Potri.011G097100 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Seita.5G263300.1 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Seita.7G262700.1 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.7G272600.1 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G250400.1 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.006G240400.1 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Solyc10g007140 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G53190.2) | 0.04 | Orthogroups_2024-Update | |
| Solyc10g050170 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G15530.7) | 0.02 | Orthogroups_2024-Update | |
| Solyc12g096420 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2) | 0.02 | Orthogroups_2024-Update | |
| Sopen12g032260 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 506 | 548 |
| No external refs found! |