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  5. At1g29970

At1g29970


Description : 60S ribosomal protein L18A-1 [Source:UniProtKB/TrEMBL;Acc:A8MRF3]


Gene families : OG_42_0002536 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002536_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g29970
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
At1g53560 No alias At1g53560 [Source:UniProtKB/TrEMBL;Acc:Q9LPH1] 0.03 Orthogroups_2024-Update
Glyma.13G261500 No alias Ribosomal protein L18ae family 0.03 Orthogroups_2024-Update
Mp3g23780.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Solyc02g070630 No alias 60S ribosomal protein L18a, putative (AHRD V3.3 *-* B9S129_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!